Sequence Data

• Genomic context sensitizes regulatory elements to genetic disruption - GEO GSE241708
• Synthetic regulatory genomics uncovers enhancer context dependence at the Sox2 locus - GEO GSE206863
• Genomic context sensitivity of insulator function - GEO GSE179485
• A versatile platform for locus-scale genome rewriting and verification - GEO GSE159488
• DNase-seq profiling of Saos-2 and U2OS cell lines - GEO GSE142160
• NYU Langone SARS-CoV-2 Sequencing Team - SRA PRJNA650245
• DNase-seq profiling of hybrid mouse cells and tissues - GEO GSE156692

Additional Resources for Publications

• Maurano et al. Nat. Genetics 2015
• Maurano et al. Science 2012

Protocols

• Big-IN and other protocols from the Center for Synthetic Regulatory Genomics

Tools

• Bedops
• CATO scores
• Maurano Lab GitHub

Reagents

• Addgene